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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs1034893 chr17:9072555 A/G 4.26E-6 490 15.17 18.93 10.5 KM Plot
THCA rs1040854 chr11:30842700 C/T 0.000203 490 15.33 17.05 8.83 KM Plot
THCA rs10415723 chr19:43595546 A/C 0.00026 483 15.33 18.93 10.08 KM Plot
THCA rs10427302 chr2:29099040 A/G 9.97E-5 488 14.3 17.25 15.9 KM Plot
THCA rs1042858 chr11:4159466 G/A 1.74E-7 489 19.05 13.97 16.38 KM Plot
THCA rs1042919 chr11:4159764 A/T 1.74E-7 490 19.05 13.9 16.38 KM Plot
THCA rs1042927 chr11:4159929 C/A 1.74E-7 490 19.05 13.9 16.38 KM Plot
THCA rs10431142 chr11:62598144 G/T 7.89E-5 490 16.23 14.17 14.27 KM Plot
THCA rs10431143 chr11:62598229 C/G 7.89E-5 490 16.23 14.17 14.27 KM Plot
THCA rs10431144 chr11:62598296 A/G 8.34E-5 490 16.23 14.17 14.27 KM Plot
THCA rs10431892 chr16:20618632 G/A 5.91E-6 487 15.9 17.73 14.35 KM Plot
THCA rs10431893 chr16:20618902 A/G 1.95E-6 490 17.08 17.47 15.9 KM Plot
THCA rs10431899 chr16:20618618 C/T 3.55E-6 487 15.93 17.55 14.27 KM Plot
THCA rs1043481 chr19:16633950 T/C 0.000113 475 12.47 17.63 15.3 KM Plot
THCA rs1044717 chr1:45976587 A/G 4.14E-5 489 10.4 16.07 16.97 KM Plot